C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000528803  |
SLC6A9-011 |
ENSG00000196517 |
9606 | - |
1:44008597-44017332  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B8 | CIL_0009B8_0001 | VISTA | 1:43734711-44337665 |
| CIL_0008SF | CIL_0008SF_0001 | VISTA | 1:43949748-44550457 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003333 | IEA | amino acid transmembrane transport |
| GO:0005283 | IEA | sodium:amino acid symporter activity |
| GO:0005328 | IEA | neurotransmitter:sodium symporter activity |
| GO:0005887 | IEA | integral component of plasma membrane |
| GO:0006836 | IEA | neurotransmitter transport |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000132043
|
Slc6a9-006 | protein_coding | Mus_musculus | 0 | 628 |
|
ENSMUST00000169990
|
Slc6a9-013 | protein_coding | Mus_musculus | 0 | 529 |
|
ENSMUST00000030269
|
Slc6a9-001 | protein_coding | Mus_musculus | 0 | 525 |
|
ENSMUST00000063857
|
Slc6a9-003 | protein_coding | Mus_musculus | 0 | 525 |
|
ENSMUST00000136476
|
Slc6a9-008 | processed_transcript | Mus_musculus | 0 | 486 |
|
ENSMUST00000163288
|
Slc6a9-010 | protein_coding | Mus_musculus | 0 | 303 |
|
ENSMUST00000135769
|
Slc6a9-007 | processed_transcript | Mus_musculus | 0 | 268 |
|
ENSMUST00000123994
|
Slc6a9-011 | protein_coding | Mus_musculus | 0 | 252 |
|
ENSMUST00000149168
|
Slc6a9-002 | nonsense_mediated_decay | Mus_musculus | 0 | 252 |
