C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMG1 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529428 SMG1P5-001 ENSG00000183604 9606 - 16:30267553-30335054 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryENST00000529428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary
ENST00000529428 0.003±0.00 0.015±0.00 0.083±0.00 0.044±0.00 0.087±0.00 0.099±0.00 0.023±0.00 0.078±0.08 0.236±0.00 0.056±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032891 Smg1-001 protein_coding Mus_musculus 0 5295
ENSMUST00000179331 Smg1-005 protein_coding Mus_musculus 0 4684
ENSMUST00000180009 Smg1-003 retained_intron Mus_musculus 0 1803
ENSMUST00000179047 Smg1-002 protein_coding Mus_musculus 0 1415
ENSMUST00000179847 Smg1-004 retained_intron Mus_musculus 0 1131

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