C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 76
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529475 HNRNPA1P76-001 ENSG00000255141 9606 - 11:3972881-3974237 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyMuscleOvaryTestisENST00000529475
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Muscle Ovary Testis
ENST00000529475 0.062±0.00 0.114±0.00 0.451±0.00 0.036±0.00 0.316±0.27 0.592±0.00 0.385±0.00 0.121±0.11 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G2 CIL_0000G2_0002 CGP 11:3826978-4093210
CIL_0005LF CIL_0005LF_0001 CGP 11:3854527-4138876

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 569
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 285
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 279
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 235
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 224
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 1e-35 154
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 1e-25 121
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 0.00000002 64

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