C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single stranded DNA binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530618 SSBP3-003 ENSG00000157216 9606 - 1:54242856-54251671 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0001 VISTA 1:54159373-54763153
CIL_0006W6 CIL_0006W6_0002 CGP 1:54184041-54413479
CIL_00005A CIL_00005A_0002 CGP 1:54225432-54639192

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137786 Ssbp3-012 processed_transcript Mus_musculus 0 294
ENSMUST00000124936 Ssbp3-007 processed_transcript Mus_musculus 2e-26 122
ENSMUST00000141963 Ssbp3-004 processed_transcript Mus_musculus 2e-26 122
ENSMUST00000138475 Ssbp3-008 processed_transcript Mus_musculus 2e-26 122
ENSMUST00000146659 Ssbp3-003 processed_transcript Mus_musculus 2e-26 122
ENSMUST00000097934 Ssbp3-006 protein_coding Mus_musculus 2e-26 122
ENSMUST00000072753 Ssbp3-002 protein_coding Mus_musculus 2e-26 122
ENSMUST00000149926 Ssbp3-017 protein_coding Mus_musculus 2e-26 122
ENSMUST00000030367 Ssbp3-001 protein_coding Mus_musculus 2e-26 122
ENSMUST00000131111 Ssbp3-013 processed_transcript Mus_musculus 2e-17 94
ENSMUST00000150915 Ssbp3-005 processed_transcript Mus_musculus 0.00000002 64
ENSMUST00000131440 Ssbp3-010 protein_coding Mus_musculus 0.0000002 60

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