C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleotide-binding oligomerization domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531674 NOD2-004 ENSG00000167207 9606 + 16:50693626-50699933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartENST00000531674
Transcript ID Colon Heart
ENST00000531674 0.111±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0001 UCNEbase 16:50459337-51906374
CIL_00090I CIL_00090I_0001 VISTA 16:50514444-51115745
CIL_00085B CIL_00085B_0001 VISTA 16:50535781-51137187
CIL_00090J CIL_00090J_0001 VISTA 16:50540952-51141798
CIL_00090K CIL_00090K_0001 VISTA 16:50643117-51244272
CIL_00090L CIL_00090L_0001 VISTA 16:50648118-51248778
CIL_0003PS CIL_0003PS_0001 CGP 16:50666300-50733077
CIL_00090M CIL_00090M_0001 VISTA 16:50676779-51277697
CIL_0003PR CIL_0003PR_0001 CGP 16:50693603-50801935

Gene Ontology

GO IDEvidence TypeGO Description
GO:0042981 IEA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124091 Nod2-004 retained_intron Mus_musculus 0 359
ENSMUST00000054324 Nod2-003 protein_coding Mus_musculus 0 359
ENSMUST00000118370 Nod2-001 protein_coding Mus_musculus 0 359
ENSMUST00000109634 Nod2-002 protein_coding Mus_musculus 0 357

Loading