C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532683 RBM25-004 ENSG00000119707 9606 + 14:73058542-73120129 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryTestisENST00000532683
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Testis
ENST00000532683 1.498±0.00 2.979±0.00 1.198±0.00 1.953±1.35 1.654±0.21 0.649±0.00 1.384±0.00 0.854±0.56 2.222±0.00 5.260±0.00 11.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0001TO CIL_0001TO_0001 CGP 14:72969451-73123898
CIL_0003OW CIL_0003OW_0001 CGP 14:73058436-73223691

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182255 Rbm25-004 retained_intron Mus_musculus 0 2449
ENSMUST00000182450 Rbm25-020 nonsense_mediated_decay Mus_musculus 0 1600
ENSMUST00000048155 Rbm25-002 protein_coding Mus_musculus 0 1600
ENSMUST00000181983 Rbm25-003 protein_coding Mus_musculus 0 1258
ENSMUST00000182036 Rbm25-009 protein_coding Mus_musculus 0 789
ENSMUST00000183181 Rbm25-016 retained_intron Mus_musculus 0 750
ENSMUST00000183128 Rbm25-013 retained_intron Mus_musculus 0 662
ENSMUST00000182633 Rbm25-010 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000182618 Rbm25-012 protein_coding Mus_musculus 0 634
ENSMUST00000183039 Rbm25-021 processed_transcript Mus_musculus 0 444
ENSMUST00000182840 Rbm25-015 processed_transcript Mus_musculus 0 442
ENSMUST00000183154 Rbm25-008 protein_coding Mus_musculus 0 366
ENSMUST00000182004 Rbm25-007 protein_coding Mus_musculus 0 364
ENSMUST00000182032 Rbm25-005 retained_intron Mus_musculus 0 207
ENSMUST00000183282 Rbm25-014 processed_transcript Mus_musculus 9.80909e-45 187
ENSMUST00000182347 Rbm25-011 protein_coding Mus_musculus 4e-19 102

Loading