C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 1, (mu/I) large subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533129 CAPN1-028 ENSG00000014216 9606 + 11:65181733-65211858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000533129
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000533129 23.629±0.00 28.993±0.00 21.250±0.00 32.403±0.00 25.654±0.00 10.008±0.00 24.149±22.19 12.827±0.00 21.084±0.00 11.326±7.52 39.594±8.45 35.000±15.29 22.566±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IEA:ISS calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006508 IEA:ISS proteolysis
GO:0008284 TAS positive regulation of cell proliferation
GO:0016020 IDA membrane
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025891 Capn1-201 protein_coding Mus_musculus 0 2294
ENSMUST00000164843 Capn1-202 protein_coding Mus_musculus 0 2294

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