C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycystic kidney disease 1-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534447 PKD1L2-010 ENSG00000166473 9606 - 16:81100875-81113981 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000534447
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000534447 0.149±0.00 0.174±0.00 0.368±0.00 0.250±0.11 0.214±0.00 0.185±0.00 0.165±0.00 0.089±0.00 0.154±0.00 0.064±0.00 0.088±0.02 0.057±0.01 0.237±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043F CIL_00043F_0001 CGP 16:81081961-81181213

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.000008 58
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.00003 57

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