C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 7, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534609 CLEC7A-005 ENSG00000172243 9606 - 12:10116777-10130257 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverLungOvaryTestisENST00000534609
Transcript ID Adipose Bladder Brain Colon Liver Lung Ovary Testis
ENST00000534609 0.625±0.00 0.073±0.00 0.380±0.00 0.840±0.00 0.059±0.00 3.320±0.00 0.216±0.01 0.215±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TC CIL_0000TC_0001 CGP 12:10069554-10130258
CIL_0000T7 CIL_0000T7_0001 CGP 12:10116777-10172138

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 0.00000000005 75
ENSMUST00000057256 6030458C11Rik-201 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000027629 Tfcp2l1-001 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.0000004 62
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.0000004 62

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