C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537438 RP11-137N23.1-001 ENSG00000257043 9606 + 11:18665050-18665548 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000537438
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000537438 0.074±0.00 0.294±0.00 0.196±0.00 0.153±0.00 0.389±0.17 0.353±0.24 0.034±0.00 0.629±0.00 0.129±0.00 0.299±0.07 0.119±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041C CIL_00041C_0002 CGP 11:18606401-18704785

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130216 Srsf3-001 protein_coding Mus_musculus 0 599
ENSMUST00000104933 Gm12355-001 protein_coding Mus_musculus 0 553
ENSMUST00000178617 Gm7083-201 processed_pseudogene Mus_musculus 0 455
ENSMUST00000150157 Srsf3-005 retained_intron Mus_musculus 0 217
ENSMUST00000037776 Srsf3-002 nonsense_mediated_decay Mus_musculus 0 213
ENSMUST00000147265 Srsf3-003 retained_intron Mus_musculus 5.00264e-43 178

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