| Transcript ID | Brain | Ovary | Placenta |
|---|---|---|---|
| ENST00000537686 | 3.202±0.00 | 6.896±0.00 | 6.285±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | golgi-associated, gamma adaptin ear containing, ARF binding protein 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000537686  |
GGA3-002 |
ENSG00000125447 |
9606 | - |
17:75236599-75261804  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PW | CIL_0008PW_0001 | VISTA | 17:75051738-75652852 |
| CIL_0007IW | CIL_0007IW_0001 | CGP | 17:75205659-75262363 |
| CIL_0007I1 | CIL_0007I1_0001 | CGP | 17:75236599-75266373 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0005768 | IEA | endosome |
| GO:0005802 | IEA:IDA | trans-Golgi network |
| GO:0006886 | IEA:NAS | intracellular protein transport |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0030131 | IEA | clathrin adaptor complex |
| GO:0030306 | IEA:IDA | ADP-ribosylation factor binding |
| GO:0045732 | IEA | positive regulation of protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000019135
|
Gga3-001 | protein_coding | Mus_musculus | 0 | 2165 |
|
ENSMUST00000156173
|
Gga3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1522 |
|
ENSMUST00000106508
|
Gga3-002 | protein_coding | Mus_musculus | 0 | 1195 |
|
ENSMUST00000128437
|
Gga3-006 | processed_transcript | Mus_musculus | 0 | 606 |
|
ENSMUST00000123485
|
Gga3-010 | processed_transcript | Mus_musculus | 0 | 577 |
|
ENSMUST00000148782
|
Gga3-008 | processed_transcript | Mus_musculus | 0 | 564 |
|
ENSMUST00000125097
|
Gga3-007 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000123831
|
Gga3-009 | processed_transcript | Mus_musculus | 0 | 283 |
|
ENSMUST00000154832
|
Gga3-011 | processed_transcript | Mus_musculus | 0 | 252 |
|
ENSMUST00000041587
|
Gga1-201 | protein_coding | Mus_musculus | 0 | 241 |
|
ENSMUST00000132503
|
Gga3-005 | processed_transcript | Mus_musculus | 0.000000000000002 | 90 |
