C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538404 LAMTOR1-004 ENSG00000149357 9606 - 11:72097348-72103236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLiverLungENST00000538404
Transcript ID Bladder Breast Liver Lung
ENST00000538404 1.454±0.00 0.763±0.00 1.172±0.00 0.818±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457
CIL_0002MI CIL_0002MI_0001 CGP 11:72080331-72110782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001919 IEA regulation of receptor recycling
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007040 IEA lysosome organization
GO:0032008 IEA positive regulation of TOR signaling
GO:0032439 IEA endosome localization
GO:0042632 IEA cholesterol homeostasis
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043410 IEA positive regulation of MAPK cascade
GO:0071230 IEA cellular response to amino acid stimulus
GO:0071986 IEA Ragulator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033131 Lamtor1-201 protein_coding Mus_musculus 0 579
ENSMUST00000117826 Gm5510-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000121941 Gm13077-001 processed_pseudogene Mus_musculus 0 520

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