C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongator acetyltransferase complex subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539560 ELP2-002 ENSG00000134759 9606 + 18:36129901-36174721 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverENST00000539560
Transcript ID Brain Breast Colon Kidney Liver
ENST00000539560 4.277±0.97 2.490±0.00 3.274±0.00 5.303±0.40 4.354±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000T CIL_00000T_0001 CGP 18:36108532-36180556
CIL_00000L CIL_00000L_0001 CGP 18:36129444-36272157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IEA protein binding
GO:0005730 IC nucleolus
GO:0005737 IDA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006368 IC transcription elongation from RNA polymerase II promoter
GO:0008023 IDA transcription elongation factor complex
GO:0016591 IC DNA-directed RNA polymerase II, holoenzyme
GO:0033588 IDA Elongator holoenzyme complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025120 Elp2-201 protein_coding Mus_musculus 0 1613

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