C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: limbic system-associated membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539563 LSAMP-201 ENSG00000185565 9606 - 3:115802363-116086561 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungOvaryTestisENST00000539563
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Ovary Testis
ENST00000539563 0.054±0.00 0.151±0.00 13.300±5.77 2.702±0.00 0.263±0.06 0.302±0.28 2.829±0.00 0.430±0.00 1.470±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L7 CIL_0000L7_0002 CGP 3:115623324-117139389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099761 Lsamp-002 protein_coding Mus_musculus 0 2132
ENSMUST00000187695 Lsamp-005 protein_coding Mus_musculus 0 2132
ENSMUST00000078873 Lsamp-001 protein_coding Mus_musculus 0 1171
ENSMUST00000145951 Lsamp-003 protein_coding Mus_musculus 0 368
ENSMUST00000133853 Lsamp-004 protein_coding Mus_musculus 0 311

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