C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539783 DCAF17-201 ENSG00000115827 9606 + 2:171434251-171485048 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleOvaryPlacentaENST00000539783
Transcript ID Brain Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000539783 0.905±0.00 0.491±0.00 0.291±0.00 0.864±0.00 0.698±0.00 0.628±0.00 1.200±0.00 0.677±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S9 CIL_0004S9_0001 CGP 2:170990823-171434802
CIL_0002PA CIL_0002PA_0001 CGP 2:171317405-171485052
CIL_0003IN CIL_0003IN_0002 CGP 2:171434217-171558133

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102701 Dcaf17-004 protein_coding Mus_musculus 0 1275
ENSMUST00000064141 Dcaf17-007 protein_coding Mus_musculus 0 1275
ENSMUST00000154704 Dcaf17-001 protein_coding Mus_musculus 0 1275
ENSMUST00000112167 Dcaf17-006 nonsense_mediated_decay Mus_musculus 0 1131
ENSMUST00000130292 Dcaf17-002 protein_coding Mus_musculus 0 1107
ENSMUST00000112159 Dcaf17-003 protein_coding Mus_musculus 0 944
ENSMUST00000135357 Dcaf17-008 protein_coding Mus_musculus 0 774
ENSMUST00000136299 Dcaf17-005 nonsense_mediated_decay Mus_musculus 0 298
ENSMUST00000132619 Dcaf17-009 processed_transcript Mus_musculus 0 237

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