C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretogranin III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542355 SCG3-002 ENSG00000104112 9606 + 15:51681492-51720071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungOvaryPlacentaTestisENST00000542355
Transcript ID Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000542355 0.254±0.06 0.013±0.00 0.094±0.00 0.040±0.00 0.058±0.03 0.026±0.01 0.845±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YR CIL_0007YR_0001 VISTA 15:51100773-51703779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005576 TAS extracellular region
GO:0007596 TAS blood coagulation
GO:0016020 IEA membrane
GO:0030168 TAS platelet activation
GO:0034774 TAS secretory granule lumen
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034699 Scg3-201 protein_coding Mus_musculus 0 1437

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