C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gephyrin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543237 GPHN-007 ENSG00000171723 9606 + 14:66508504-67181023 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryENST00000543237
Transcript ID Brain Breast Heart Ovary
ENST00000543237 4.968±0.92 1.712±0.34 0.489±0.00 0.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KA CIL_0001KA_0002 CGP 14:65410592-67181803
CIL_00010J CIL_00010J_0001 CGP 14:66507407-67228550

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006777 IEA Mo-molybdopterin cofactor biosynthetic process
GO:0032324 IEA molybdopterin cofactor biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052472 Gphn-201 protein_coding Mus_musculus 0 3247
ENSMUST00000110388 Gphn-202 protein_coding Mus_musculus 0 2209
ENSDART00000087952 gphnb-201 protein_coding Danio_rerio 0 835
ENSDART00000133078 gphnb-001 protein_coding Danio_rerio 0 835
ENSDART00000153942 gphna-002 protein_coding Danio_rerio 0 462
ENSDART00000157289 gphna-003 retained_intron Danio_rerio 0 300

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