C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | paxillin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000543331  |
PXN-009 |
ENSG00000089159 |
9606 | - |
12:120222717-120226795  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009CQ | CIL_0009CQ_0001 | VISTA | 12:119991644-120595694 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005856 | IEA | cytoskeleton |
| GO:0005925 | IDA | focal adhesion |
| GO:0007160 | IEA | cell-matrix adhesion |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000125007
|
Pxn-004 | processed_transcript | Mus_musculus | 0 | 538 |
|
ENSMUST00000157050
|
Pxn-008 | processed_transcript | Mus_musculus | 0 | 536 |
|
ENSMUST00000137716
|
Pxn-007 | processed_transcript | Mus_musculus | 0 | 536 |
|
ENSMUST00000086523
|
Pxn-002 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000067268
|
Pxn-001 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000152156
|
Pxn-005 | retained_intron | Mus_musculus | 0 | 512 |
|
ENSMUST00000153682
|
Pxn-009 | processed_transcript | Mus_musculus | 0 | 414 |
|
ENSMUST00000134198
|
Pxn-013 | processed_transcript | Mus_musculus | 0 | 335 |
|
ENSMUST00000127345
|
Pxn-010 | processed_transcript | Mus_musculus | 0 | 291 |
|
ENSMUST00000129897
|
Pxn-006 | processed_transcript | Mus_musculus | 0 | 283 |
|
ENSMUST00000125054
|
Pxn-003 | retained_intron | Mus_musculus | 0 | 267 |
