C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NODAL modulator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543392 NOMO2-201 ENSG00000185164 9606 - 16:18499936-18562074 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543392
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543392 1.072±0.00 0.381±0.00 0.185±0.00 0.634±0.28 0.671±0.06 0.592±0.11 1.072±0.30 0.570±0.21 0.472±0.32 0.492±0.27 0.853±0.67 0.400±0.18 1.422±0.15 0.436±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RM CIL_0008RM_0001 VISTA 16:17846504-18447239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033121 Nomo1-001 protein_coding Mus_musculus 0 3441
ENSMUST00000182305 Nomo1-005 retained_intron Mus_musculus 0 222

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