C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13 homolog D (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543710 VPS13D-005 ENSG00000048707 9606 + 1:12367670-12512047 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLungOvaryPlacentaENST00000543710
Transcript ID Heart Kidney Lung Ovary Placenta
ENST00000543710 3.454±0.00 3.979±0.00 2.804±0.00 3.575±0.00 1.505±0.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185113 Vps13d-010 protein_coding Mus_musculus 0 2278
ENSMUST00000020441 Vps13d-001 protein_coding Mus_musculus 0 2278
ENSMUST00000130704 Vps13d-003 nonsense_mediated_decay Mus_musculus 0 2278
ENSMUST00000036579 Vps13d-002 protein_coding Mus_musculus 0 2278
ENSMUST00000147511 Vps13d-006 processed_transcript Mus_musculus 0 652
ENSMUST00000141208 Vps13d-007 retained_intron Mus_musculus 0 486
ENSMUST00000144835 Vps13d-005 processed_transcript Mus_musculus 0 457

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