C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium inwardly-rectifying channel, subfamily J, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544049 KCNJ3-201 ENSG00000162989 9606 + 2:154698581-154858352 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544049
Transcript ID Adrenal Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544049 0.170±0.00 0.089±0.00 0.647±0.00 0.128±0.02 0.086±0.00 0.115±0.00 0.101±0.00 0.016±0.01 0.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075B CIL_00075B_0001 CGP 2:153871913-154858352
CIL_000758 CIL_000758_0001 CGP 2:154698299-156342348

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005242 IDA:IEA inward rectifier potassium channel activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 TAS voltage-gated potassium channel complex
GO:0015467 IEA G-protein activated inward rectifier potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112632 Kcnj3-002 protein_coding Mus_musculus 0 2510
ENSMUST00000067101 Kcnj3-001 protein_coding Mus_musculus 0 1411
ENSMUST00000112633 Kcnj3-201 protein_coding Mus_musculus 0 1114
ENSDART00000065372 KCNJ3 (1 of 2)-001 protein_coding Danio_rerio 0 590
ENSDART00000081978 KCNJ6-201 protein_coding Danio_rerio 0 222

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