C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paxillin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546532 PXN-013 ENSG00000089159 9606 - 12:120222734-120226055 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137716 Pxn-007 processed_transcript Mus_musculus 0 525
ENSMUST00000125007 Pxn-004 processed_transcript Mus_musculus 0 525
ENSMUST00000157050 Pxn-008 processed_transcript Mus_musculus 0 521
ENSMUST00000086523 Pxn-002 protein_coding Mus_musculus 0 521
ENSMUST00000067268 Pxn-001 protein_coding Mus_musculus 0 521
ENSMUST00000152156 Pxn-005 retained_intron Mus_musculus 0 512
ENSMUST00000153682 Pxn-009 processed_transcript Mus_musculus 0 414
ENSMUST00000134198 Pxn-013 processed_transcript Mus_musculus 0 335
ENSMUST00000127345 Pxn-010 processed_transcript Mus_musculus 0 291
ENSMUST00000129897 Pxn-006 processed_transcript Mus_musculus 0 283
ENSMUST00000125054 Pxn-003 retained_intron Mus_musculus 0 252

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