C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 1, catalytic subunit, gamma isozyme
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546933 PPP1CC-004 ENSG00000186298 9606 - 12:110720921-110732983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000546933
Transcript ID Kidney
ENST00000546933 1.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YU CIL_0008YU_0001 VISTA 12:110628804-111231731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102528 Ppp1cc-001 protein_coding Mus_musculus 0 1395
ENSMUST00000118909 AC164158.1-001 processed_pseudogene Mus_musculus 0 1288
ENSMUST00000086294 Ppp1cc-002 protein_coding Mus_musculus 0 1234
ENSMUST00000122076 Gm14122-001 processed_pseudogene Mus_musculus 0 1138
ENSMUST00000132555 Ppp1cc-005 retained_intron Mus_musculus 0 987
ENSMUST00000128309 Ppp1cc-009 retained_intron Mus_musculus 0 987
ENSMUST00000118774 Gm5754-001 processed_pseudogene Mus_musculus 0 939
ENSMUST00000121207 Gm11848-001 processed_pseudogene Mus_musculus 0 859
ENSDART00000092906 ppp1cab-001 protein_coding Danio_rerio 0 628
ENSMUST00000134719 Ppp1cc-008 processed_transcript Mus_musculus 0 418
ENSMUST00000142562 Ppp1cc-007 retained_intron Mus_musculus 0 394
ENSMUST00000151184 Ppp1cc-006 processed_transcript Mus_musculus 0 255

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