C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547295 BNIP3P1-001 ENSG00000197358 9606 + 14:28264554-28265133 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverPlacentaENST00000547295
Transcript ID Adrenal Brain Liver Placenta
ENST00000547295 0.057±0.00 0.140±0.07 0.018±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098P CIL_00098P_0001 VISTA 14:27830390-28431263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106112 Bnip3-001 protein_coding Mus_musculus 0 680
ENSMUST00000100687 Gm16439-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000130500 Bnip3-004 processed_transcript Mus_musculus 0 621
ENSMUST00000121165 Gm14506-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000148970 Bnip3-003 processed_transcript Mus_musculus 0 213
ENSMUST00000118706 Gm15936-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000125359 Bnip3-002 processed_transcript Mus_musculus 3e-31 139

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