C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547436 BTF3P2-001 ENSG00000258282 9606 - 14:28673241-28673727 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastMuscleOvaryTestisENST00000547436
Transcript ID Adrenal Breast Muscle Ovary Testis
ENST00000547436 0.028±0.00 0.054±0.00 0.049±0.00 0.045±0.00 0.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095I CIL_00095I_0001 VISTA 14:28456869-29058467
CIL_0008Y3 CIL_0008Y3_0001 VISTA 14:28595815-29196929

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 551
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 551
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 551
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000139070 Gm7613-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 433
ENSMUST00000117560 Gm7834-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000191444 RP23-130K20.4-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000189001 RP23-247F18.2-001 processed_pseudogene Mus_musculus 4e-39 165

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