C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POTE ankyrin domain family, member M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547848 POTEM-001 ENSG00000187537 9606 - 14:19402486-19434341 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonOvaryTestisENST00000547848
Transcript ID Adrenal Brain Breast Colon Ovary Testis
ENST00000547848 0.052±0.00 0.019±0.00 0.019±0.00 0.066±0.00 0.005±0.00 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 503
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 503
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 503
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 444
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 444
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 444
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 418
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 411
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 411
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 407
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 394
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 383
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 377
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 377
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 377
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 377
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 377
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000156343 Actg1-004 retained_intron Mus_musculus 0 370
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 370
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 370
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 361
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 333
ENSDART00000080664 protein_coding Danio_rerio 0 322
ENSMUST00000165006 Gm17228-001 processed_pseudogene Mus_musculus 0 315
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 311
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 311
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 305
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 300
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 276
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 276
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000144868 Actg1-003 retained_intron Mus_musculus 9.99995e-41 172
ENSDART00000155770 ACTC1 (2 of 2)-001 protein_coding Danio_rerio 6e-38 163
ENSMUST00000163829 Actb-004 protein_coding Mus_musculus 3e-36 158
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 7e-18 97

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