C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynactin 2 (p50)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548249 DCTN2-001 ENSG00000175203 9606 - 12:57530102-57547331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000548249
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000548249 9.550±0.00 1.363±0.00 5.073±0.00 3.947±1.33 3.732±0.00 2.428±0.00 1.829±0.00 4.564±0.00 15.054±8.33 22.076±7.64 11.615±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005869 IDA dynactin complex
GO:0005874 IEA microtubule
GO:0007052 IBA mitotic spindle organization
GO:0007067 IMP mitotic nuclear division
GO:0008152 IEA metabolic process
GO:0008283 IMP cell proliferation
GO:0016020 IEA membrane
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030286 IEA dynein complex
GO:0030507 IDA spectrin binding
GO:0031982 IDA vesicle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026479 Dctn2-201 protein_coding Mus_musculus 0 1753
ENSMUST00000119078 Mbd6-002 protein_coding Mus_musculus 0.000000000000004 88
ENSMUST00000026476 Mbd6-001 protein_coding Mus_musculus 0.000000000000004 88
ENSMUST00000126243 Mbd6-007 nonsense_mediated_decay Mus_musculus 0.000000000000004 88
ENSMUST00000136169 Mbd6-005 nonsense_mediated_decay Mus_musculus 0.000000000000004 88

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