C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550416 RP11-317N8.4-001 ENSG00000257307 9606 + 14:35881001-35881709 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungMuscleOvaryTestisENST00000550416
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Muscle Ovary Testis
ENST00000550416 0.049±0.00 0.053±0.00 0.366±0.34 0.072±0.02 0.104±0.00 0.023±0.00 0.123±0.00 0.072±0.03 0.034±0.00 0.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LS CIL_0007LS_0001 UCNEbase 14:35509773-36362792
CIL_00045N CIL_00045N_0001 CGP 14:35538352-35932325
CIL_0007WQ CIL_0007WQ_0001 VISTA 14:35812479-36414628
CIL_00045M CIL_00045M_0001 CGP 14:35826318-36320676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073308 Ewsr1-007 protein_coding Mus_musculus 0 767
ENSMUST00000093365 Ewsr1-004 protein_coding Mus_musculus 0 767
ENSMUST00000079949 Ewsr1-002 protein_coding Mus_musculus 0 767
ENSMUST00000102930 Ewsr1-009 protein_coding Mus_musculus 0 684
ENSMUST00000063232 Ewsr1-010 protein_coding Mus_musculus 0 292
ENSMUST00000144238 Ewsr1-011 processed_transcript Mus_musculus 0 248

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