| Transcript ID | Brain | Colon |
|---|---|---|
| ENST00000550558 | 0.461±0.00 | 0.419±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | acid-sensing (proton-gated) ion channel 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000550558  |
ASIC1-003 |
ENSG00000110881 |
9606 | + |
12:50057745-50083611  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PE | CIL_0008PE_0001 | VISTA | 12:49905565-50507504 |
| CIL_0008CC | CIL_0008CC_0001 | VISTA | 12:49906068-50507455 |
| CIL_00071Y | CIL_00071Y_0001 | CGP | 12:49976923-50083611 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005272 | IEA | sodium channel activity |
| GO:0006814 | IEA | sodium ion transport |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0035725 | IEA | sodium ion transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000023758
|
Asic1-201 | protein_coding | Mus_musculus | 0 | 2555 |
|
ENSDART00000028603
|
asic1b-201 | protein_coding | Danio_rerio | 0 | 634 |
|
ENSDART00000140236
|
asic1b-001 | protein_coding | Danio_rerio | 0 | 634 |
|
ENSDART00000105541
|
asic1a-201 | protein_coding | Danio_rerio | 0 | 446 |
|
ENSDART00000004588
|
asic1a-001 | protein_coding | Danio_rerio | 0 | 446 |
