C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rac GTPase activating protein 1 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550663 RACGAP1P-001 ENSG00000257331 9606 - 12:45063473-45065351 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastMuscleOvaryTestisENST00000550663
Transcript ID Adrenal Brain Breast Muscle Ovary Testis
ENST00000550663 0.007±0.00 0.061±0.03 0.056±0.05 0.006±0.00 0.007±0.00 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P6 CIL_0007P6_0001 UCNEbase 12:45034509-45102592

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023756 Racgap1-002 protein_coding Mus_musculus 0 1443
ENSMUST00000171702 Racgap1-001 protein_coding Mus_musculus 0 1443
ENSMUST00000171017 Racgap1-007 retained_intron Mus_musculus 0 614
ENSMUST00000169810 Racgap1-011 protein_coding Mus_musculus 0 514
ENSMUST00000165745 Racgap1-014 retained_intron Mus_musculus 0 477
ENSMUST00000168065 Racgap1-004 nonsense_mediated_decay Mus_musculus 0 433
ENSMUST00000170369 Racgap1-003 retained_intron Mus_musculus 0 433
ENSMUST00000165730 Racgap1-010 nonsense_mediated_decay Mus_musculus 0 327

Loading