C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 6 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550824 POU6F1-003 ENSG00000184271 9606 - 12:51189161-51197035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000550824
Transcript ID Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000550824 1.966±0.00 0.396±0.00 1.406±0.00 0.245±0.17 0.155±0.00 0.348±0.06 1.643±0.49 1.381±0.95 1.744±1.40 0.797±0.31 1.091±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033K CIL_00033K_0002 CGP 12:51093663-51217693
CIL_00033P CIL_00033P_0002 CGP 12:51186936-51271362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007420 TAS brain development
GO:0007507 TAS heart development
GO:0007517 TAS muscle organ development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176492 Pou6f1-006 retained_intron Mus_musculus 0 1319
ENSMUST00000176271 Pou6f1-005 retained_intron Mus_musculus 0 1282
ENSMUST00000176140 Pou6f1-004 nonsense_mediated_decay Mus_musculus 0 1282
ENSMUST00000073837 Pou6f1-001 protein_coding Mus_musculus 0 1279
ENSMUST00000058274 Pou6f1-201 protein_coding Mus_musculus 0 1203
ENSMUST00000176300 Pou6f1-003 nonsense_mediated_decay Mus_musculus 0 1203
ENSMUST00000177202 Pou6f1-002 nonsense_mediated_decay Mus_musculus 0 1199
ENSMUST00000184908 Pou6f1-202 protein_coding Mus_musculus 0 1070
ENSMUST00000177335 Pou6f1-007 retained_intron Mus_musculus 0 723

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