C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gastrulation brain homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551105 GBX2-003 ENSG00000168505 9606 - 2:236165729-236168009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000551105
Transcript ID Testis
ENST00000551105 0.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RE CIL_0003RE_0001 CGP 2:235494089-236168369
CIL_0007U0 CIL_0007U0_0001 VISTA 2:235564814-236166052
CIL_0007RK CIL_0007RK_0001 VISTA 2:235753955-236356213
CIL_0008K4 CIL_0008K4_0001 VISTA 2:235862720-236463204
CIL_0007XN CIL_0007XN_0001 VISTA 2:235956423-236557500
CIL_0003RD CIL_0003RD_0001 CGP 2:236165236-236264409

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036954 Gbx2-001 protein_coding Mus_musculus 0 798
ENSMUST00000187633 Gbx2-002 retained_intron Mus_musculus 0 780
ENSDART00000015333 gbx2-001 protein_coding Danio_rerio 0 207
ENSMUST00000088311 Gbx1-001 protein_coding Mus_musculus 2e-20 104

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