C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551766 RRN3P3-001 ENSG00000257122 9606 - 16:22418672-22437715 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000551766
Transcript ID Heart
ENST00000551766 0.990±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GX CIL_0006GX_0001 CGP 16:22297375-22437165
CIL_0008RG CIL_0008RG_0001 VISTA 16:22372801-22973961

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023363 Rrn3-201 protein_coding Mus_musculus 0 697
ENSMUST00000180009 Smg1-003 retained_intron Mus_musculus 0 459
ENSMUST00000032891 Smg1-001 protein_coding Mus_musculus 0 459
ENSMUST00000179047 Smg1-002 protein_coding Mus_musculus 0 451
ENSMUST00000179847 Smg1-004 retained_intron Mus_musculus 0 207

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