C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 1 (phosphorylase kinase, delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553630 CALM1-003 ENSG00000198668 9606 + 14:90397040-90405603 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000553630
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000553630 86.956±0.00 59.262±0.00 82.707±0.00 41.080±0.00 57.110±0.00 26.038±0.00 114.728±0.00 27.387±4.59 68.177±14.91 38.657±10.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U8 CIL_0001U8_0001 CGP 14:90267856-90408261
CIL_0005CA CIL_0005CA_0001 CGP 14:90396502-90816479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001204 Calm1-002 protein_coding Mus_musculus 0 1066
ENSMUST00000110082 Calm1-001 protein_coding Mus_musculus 0 1066
ENSMUST00000127300 Calm1-004 retained_intron Mus_musculus 0 366
ENSMUST00000153524 Calm1-003 retained_intron Mus_musculus 0 340

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