C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: placental growth factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553716 PGF-003 ENSG00000119630 9606 - 14:74941841-74955626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000553716
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000553716 6.472±0.00 9.963±0.00 1.456±0.00 1.595±0.00 0.448±0.41 1.240±1.09 2.099±0.00 2.439±0.00 1.358±0.00 2.325±1.10 62.587±43.34 3.453±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TN CIL_0003TN_0001 CGP 14:74903954-74955784
CIL_00084S CIL_00084S_0001 VISTA 14:74936670-75538350
CIL_0003G0 CIL_0003G0_0001 CGP 14:74941834-75012366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0008083 IMP:IEA growth factor activity
GO:0008201 IEA heparin binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation
GO:0048010 TAS vascular endothelial growth factor receptor signaling pathway
GO:0051781 IEA positive regulation of cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004913 Pgf-201 protein_coding Mus_musculus 0.00000000002 75

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