C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cTAGE family member 5 {ECO:0000313|Ensembl:ENSP00000452252}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553728 RP11-407N17.3-001 ENSG00000258941 9606 + 14:39233902-39350423 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLungOvaryENST00000553728
Transcript ID Bladder Colon Kidney Lung Ovary
ENST00000553728 3.927±0.00 1.076±0.00 3.529±1.45 0.930±0.00 0.919±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VZ CIL_0003VZ_0001 CGP 14:39230231-39350423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070971 IEA endoplasmic reticulum exit site

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176464 Ctage5-011 protein_coding Mus_musculus 0 2316
ENSMUST00000175912 Ctage5-003 protein_coding Mus_musculus 0 2314
ENSMUST00000176752 Ctage5-004 nonsense_mediated_decay Mus_musculus 0 2257
ENSMUST00000170992 Ctage5-007 protein_coding Mus_musculus 0 2087
ENSMUST00000176892 Ctage5-002 protein_coding Mus_musculus 0 2087
ENSMUST00000176322 Ctage5-008 protein_coding Mus_musculus 0 2085
ENSMUST00000069430 Ctage5-001 protein_coding Mus_musculus 0 2085
ENSMUST00000176617 Ctage5-014 nonsense_mediated_decay Mus_musculus 0 1868
ENSMUST00000176336 Ctage5-013 nonsense_mediated_decay Mus_musculus 0 1458
ENSMUST00000177162 Ctage5-012 protein_coding Mus_musculus 0 1369
ENSMUST00000177225 Ctage5-006 protein_coding Mus_musculus 0 1367
ENSMUST00000175877 Ctage5-010 protein_coding Mus_musculus 0 1140
ENSMUST00000021384 Mia2-001 protein_coding Mus_musculus 0 702
ENSMUST00000175659 Ctage5-015 retained_intron Mus_musculus 0 462
ENSMUST00000175837 Ctage5-021 nonsense_mediated_decay Mus_musculus 0 399

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