C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 38, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554072 SLC38A6-016 ENSG00000139974 9606 + 14:60984764-61034299 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SK CIL_0006SK_0002 CGP 14:60734742-60981358
CIL_00035S CIL_00035S_0002 CGP 14:60971451-61083733
CIL_0006SI CIL_0006SI_0002 CGP 14:60981114-61550976

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140523 Slc38a6-001 protein_coding Mus_musculus 0 265
ENSMUST00000134247 Slc38a6-007 retained_intron Mus_musculus 9.94922e-44 180
ENSMUST00000058139 Slc38a6-002 nonsense_mediated_decay Mus_musculus 0.000000000007 75
ENSMUST00000126488 Slc38a6-003 protein_coding Mus_musculus 0.00000000002 73
ENSMUST00000122920 Slc38a6-006 protein_coding Mus_musculus 0.00003 53

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