C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554308 SMEK1-005 ENSG00000100796 9606 - 14:91461381-91509654 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleENST00000554308
Transcript ID Colon Kidney Muscle
ENST00000554308 1.999±0.00 1.541±0.00 1.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0001 CGP 14:91271323-91510554
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048305 Smek1-201 protein_coding Mus_musculus 0 2492
ENSMUST00000163095 Smek1-202 protein_coding Mus_musculus 0 1882

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