C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554490 RPS2P2-001 ENSG00000177776 9606 - 14:74377818-74378418 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryTestisENST00000554490
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000554490 0.039±0.00 0.164±0.00 0.045±0.00 0.081±0.00 0.037±0.00 0.087±0.00 0.040±0.00 0.419±0.00 0.056±0.00 0.106±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KJ CIL_0004KJ_0002 CGP 14:74303069-74426102

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 658
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 658
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 636
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 636
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 625
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 616
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 608
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000183369 Gm18014-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000140747 Gm16305-001 unprocessed_pseudogene Mus_musculus 0 355
ENSMUST00000119539 Gm14234-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000165577 Gm17150-001 processed_pseudogene Mus_musculus 0 294

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