C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, alpha subunit 1 (catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554573 RALGAPA1-006 ENSG00000174373 9606 - 14:35538352-35627276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554573
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554573 1.590±0.00 1.494±0.00 2.355±0.00 0.734±0.00 1.680±0.00 1.274±0.00 3.083±0.00 0.452±0.00 2.501±0.00 0.913±0.00 1.933±0.25 0.646±0.25 1.895±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MF CIL_0008MF_0001 VISTA 14:35250818-35851792
CIL_0008ME CIL_0008ME_0001 VISTA 14:35273755-35874460
CIL_0007LS CIL_0007LS_0001 UCNEbase 14:35509773-36362792
CIL_00045O CIL_00045O_0001 CGP 14:35534042-35809304
CIL_00045N CIL_00045N_0001 CGP 14:35538352-35932325

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085385 Ralgapa1-201 protein_coding Mus_musculus 0 1328
ENSMUST00000110687 Ralgapa1-202 protein_coding Mus_musculus 0 1328

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