C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: placental growth factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555567 PGF-001 ENSG00000119630 9606 - 14:74941834-74955784 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLungMuscleOvaryTestisENST00000555567
Transcript ID Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000555567 0.165±0.00 1.751±0.00 0.610±0.00 0.538±0.00 3.004±0.00 1.171±0.00 0.823±0.28 1.377±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TN CIL_0003TN_0001 CGP 14:74903954-74955784
CIL_00084S CIL_00084S_0001 VISTA 14:74936670-75538350
CIL_0003G0 CIL_0003G0_0001 CGP 14:74941834-75012366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0001666 IEA response to hypoxia
GO:0001938 IEA positive regulation of endothelial cell proliferation
GO:0002040 IEA sprouting angiogenesis
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0007565 IEA female pregnancy
GO:0008083 IMP:IEA growth factor activity
GO:0008201 IEA heparin binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation
GO:0031100 IEA organ regeneration
GO:0032870 IEA cellular response to hormone stimulus
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0045766 IEA positive regulation of angiogenesis
GO:0046982 IEA protein heterodimerization activity
GO:0048010 TAS vascular endothelial growth factor receptor signaling pathway
GO:0051781 IEA positive regulation of cell division
GO:0060688 IEA regulation of morphogenesis of a branching structure

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004913 Pgf-201 protein_coding Mus_musculus 0.0000000000006 81

Loading