C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556162 SNX6-003 ENSG00000129515 9606 - 14:34562660-34630158 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENST00000556162
Transcript ID Heart Kidney Muscle
ENST00000556162 2.363±0.00 1.009±0.00 2.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RR CIL_0008RR_0001 VISTA 14:33972978-34576380
CIL_0005RF CIL_0005RF_0002 CGP 14:34515929-34630183
CIL_0005RE CIL_0005RE_0002 CGP 14:34561094-34714823

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005798 Snx6-201 protein_coding Mus_musculus 0 1105

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