C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural precursor cell expressed, developmentally down-regulated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557644 NEDD1-003 ENSG00000139350 9606 + 12:96907466-96952270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLungMuscleOvaryPlacentaTestisENST00000557644
Transcript ID Bladder Brain Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000557644 1.337±0.00 0.513±0.19 2.550±0.00 1.060±0.00 1.927±0.00 1.580±0.00 2.464±0.00 1.214±0.69 3.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UU CIL_0007UU_0001 VISTA 12:96774925-97377311

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000242 IEA pericentriolar material
GO:0000278 TAS mitotic cell cycle
GO:0000922 IEA spindle pole
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005814 IEA centriole
GO:0005829 TAS cytosol
GO:0007067 IEA mitotic nuclear division
GO:0036064 IEA ciliary basal body
GO:0045177 IEA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020163 Nedd1-201 protein_coding Mus_musculus 0 2098

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