C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAFB-like, transcription modulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557924 SLTM-011 ENSG00000137776 9606 - 15:58879560-58933599 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartMuscleOvaryPlacentaTestisENST00000557924
Transcript ID Adipose Brain Heart Muscle Ovary Placenta Testis
ENST00000557924 2.716±0.00 4.694±0.00 2.723±0.00 5.253±0.00 8.250±0.00 12.606±0.00 9.895±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024E CIL_00024E_0001 CGP 15:58865175-59097419

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049263 Sltm-201 protein_coding Mus_musculus 0 2573
ENSDART00000123464 sltm-202 protein_coding Danio_rerio 1e-31 143
ENSDART00000139546 sltm-006 protein_coding Danio_rerio 1e-31 143
ENSDART00000142723 sltm-005 retained_intron Danio_rerio 1e-31 143
ENSDART00000142818 sltm-001 protein_coding Danio_rerio 1e-31 143
ENSDART00000142480 sltm-002 processed_transcript Danio_rerio 1e-26 126

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