C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558357 INO80-002 ENSG00000128908 9606 - 15:40979466-41116132 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyMuscleOvaryENST00000558357
Transcript ID Adipose Adrenal Brain Breast Kidney Muscle Ovary
ENST00000558357 0.912±0.00 1.629±0.00 0.636±0.00 1.009±0.00 0.961±0.00 0.356±0.00 0.669±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IM CIL_0005IM_0002 CGP 15:40952962-41116354
CIL_000798 CIL_000798_0001 CGP 15:40978880-41230743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0008152 IEA metabolic process
GO:0016817 IEA hydrolase activity, acting on acid anhydrides

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110808 Ino80-002 protein_coding Mus_musculus 0 4580
ENSMUST00000049920 Ino80-001 protein_coding Mus_musculus 0 4580
ENSMUST00000138707 Ino80-003 retained_intron Mus_musculus 0 296

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