C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial methionyl-tRNA formyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558460 MTFMT-003 ENSG00000103707 9606 - 15:65002578-65029616 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000558460
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000558460 1.958±0.00 2.674±0.00 1.117±0.26 1.917±0.00 0.908±0.66 4.874±0.00 1.634±1.02 1.248±0.87 1.268±0.73 3.482±0.00 4.830±1.09 1.677±0.32 3.204±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004479 IEA methionyl-tRNA formyltransferase activity
GO:0006413 IEA translational initiation
GO:0009058 IEA biosynthetic process
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0071951 IEA conversion of methionyl-tRNA to N-formyl-methionyl-tRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074792 Mtfmt-001 protein_coding Mus_musculus 0 1122
ENSMUST00000132966 Mtfmt-002 retained_intron Mus_musculus 0 532

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