C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 17 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558517 RBM17P4-001 ENSG00000259585 9606 - 15:35298249-35299440 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000558517
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000558517 0.143±0.00 0.431±0.00 0.133±0.00 0.064±0.01 0.218±0.00 0.035±0.02 0.013±0.00 0.257±0.00 0.230±0.00 0.271±0.15 1.137±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040314 Rbm17-001 protein_coding Mus_musculus 0 1201
ENSMUST00000156469 Rbm17-003 protein_coding Mus_musculus 0 377
ENSMUST00000150369 Rbm17-005 processed_transcript Mus_musculus 0 335
ENSMUST00000125808 Rbm17-006 processed_transcript Mus_musculus 0 217

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