C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurotrophic tyrosine kinase, receptor, type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558676 NTRK3-015 ENSG00000140538 9606 - 15:87926656-88256179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungPlacentaENST00000558676
Transcript ID Colon Liver Lung Placenta
ENST00000558676 0.191±0.00 0.065±0.00 0.256±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NY CIL_0000NY_0001 CGP 15:86141996-88256768
CIL_0001AZ CIL_0001AZ_0001 CGP 15:87859751-88467419

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0004714 IEA transmembrane receptor protein tyrosine kinase activity
GO:0005030 IEA neurotrophin receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005887 IEA integral component of plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0007169 IEA transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0038179 IEA neurotrophin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039431 Ntrk3-001 protein_coding Mus_musculus 0 2833
ENSMUST00000039438 Ntrk3-002 protein_coding Mus_musculus 0 2091
ENSMUST00000155795 Ntrk3-003 retained_intron Mus_musculus 0 1855
ENSDART00000135885 ntrk2b-001 protein_coding Danio_rerio 0 279
ENSDART00000002966 ntrk2b-201 protein_coding Danio_rerio 0 274
ENSMUST00000151885 Ntrk3-004 processed_transcript Mus_musculus 0 243

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