C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cancer susceptibility candidate 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558847 CASC4-009 ENSG00000166734 9606 + 15:44337764-44413543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000558847
Transcript ID Bladder
ENST00000558847 14.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000687 CIL_000687_0001 CGP 15:43870761-44415758
CIL_0004QJ CIL_0004QJ_0002 CGP 15:44288729-44529038

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110586 Casc4-201 protein_coding Mus_musculus 0 479
ENSMUST00000136023 Casc4-007 protein_coding Mus_musculus 0 466
ENSMUST00000089915 Casc4-003 protein_coding Mus_musculus 0 364
ENSMUST00000126256 Casc4-004 processed_transcript Mus_musculus 0 196
ENSMUST00000089912 Casc4-002 protein_coding Mus_musculus 0 196
ENSMUST00000078752 Casc4-001 protein_coding Mus_musculus 0 196

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