C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559133 FBN1-004 ENSG00000166147 9606 - 15:48410074-48467991 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000559133
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000559133 19.095±0.00 7.760±0.00 1.139±0.55 26.361±15.25 13.936±7.85 7.966±0.00 5.887±0.00 1.396±0.00 11.678±0.00 2.730±0.82 12.099±5.28 108.017±76.31 17.547±8.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GC CIL_0008GC_0001 VISTA 15:48330070-48933845
CIL_0004NG CIL_0004NG_0001 CGP 15:48331011-48645849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103234 Fbn1-003 protein_coding Mus_musculus 0 2787
ENSMUST00000028633 Fbn1-001 protein_coding Mus_musculus 0 2787
ENSMUST00000025497 Fbn2-201 protein_coding Mus_musculus 0 405

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